Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

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Genes Targeted by hsa-mir-548d-3p in SRS Ovarian Hendrix Cluster 57 Table contains all genes in the SRS Ovarian Hendrix cluster number 57. If a gene harbors a predicted miRNA binding site by one of the three inference methods it is displayed in the final column: M = Weeder-miRvestigator predicted site, P = PITA predicted site and T = TargetScan predicted site. Entrez ID Symbol Description hsa-mir-548d-3p 171392 ZNF675 zinc finger protein 675 [Source:HGNC Symbol;Acc:30768] zzz999 140461 ASB8 ankyrin repeat and SOCS box containing 8 [Source:HGNC Symbol;Acc:17183] zzz999 7748 ZNF195 zinc finger protein 195 [Source:HGNC Symbol;Acc:12986] zzz999 1016 CDH18 cadherin 18, type 2 [Source:HGNC Symbol;Acc:1757] zzz999 658 BMPR1B bone morphogenetic protein receptor, type IB [Source:HGNC Symbol;Acc:1077] T 9557 CHD1L chromodomain helicase DNA binding protein 1-like [Source:HGNC Symbol;Acc:1916] zzz999 10505 SEMA4F sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F [Source:HGNC Symbol;Acc:10734] T 51008 ASCC1 activating signal cointegrator 1 complex subunit 1 [Source:HGNC Symbol;Acc:24268] T 5987 TRIM27 tripartite motif containing 27 [Source:HGNC Symbol;Acc:9975] zzz999 27065 zzz999 Neuron-specific protein family member 1 [Source:UniProtKB/Swiss-Prot;Acc:P42857] T 5528 PPP2R5D protein phosphatase 2, regulatory subunit B', delta [Source:HGNC Symbol;Acc:9312] zzz999 9477 MED20 mediator complex subunit 20 [Source:HGNC Symbol;Acc:16840] T 7976 FZD3 frizzled homolog 3 (Drosophila) [Source:HGNC Symbol;Acc:4041] T 11159 RABL2A RAB, member of RAS oncogene family-like 2A [Source:HGNC Symbol;Acc:9799] T 23530 NNT nicotinamide nucleotide transhydrogenase [Source:HGNC Symbol;Acc:7863] zzz999 27436 EML4 echinoderm microtubule associated protein like 4 [Source:HGNC Symbol;Acc:1316] T 57178 ZMIZ1 zinc finger, MIZ-type containing 1 [Source:HGNC Symbol;Acc:16493] P T 8575 PRKRA protein kinase, interferon-inducible double stranded RNA dependent activator [Source:HGNC Symbol;Acc:9438] zzz999 25941 C18orf10 chromosome 18 open reading frame 10 [Source:HGNC Symbol;Acc:24561] zzz999 57795 FAM5B family with sequence similarity 5, member B [Source:HGNC Symbol;Acc:13746] zzz999 51479 ANKFY1 ankyrin repeat and FYVE domain containing 1 [Source:HGNC Symbol;Acc:20763] T 51573 GDE1 glycerophosphodiester phosphodiesterase 1 [Source:HGNC Symbol;Acc:29644] T 222658 KCTD20 potassium channel tetramerisation domain containing 20 [Source:HGNC Symbol;Acc:21052] T 2903 GRIN2A glutamate receptor, ionotropic, N-methyl D-aspartate 2A [Source:HGNC Symbol;Acc:4585] zzz999 1314 COPA coatomer protein complex, subunit alpha [Source:HGNC Symbol;Acc:2230] zzz999 55506 H2AFY2 H2A histone family, member Y2 [Source:HGNC Symbol;Acc:14453] zzz999 7417 VDAC2 voltage-dependent anion channel 2 [Source:HGNC Symbol;Acc:12672] T 2064 ERBB2 v-erb-b2 erythroblastic leukemia viral oncogene homolog 2, neuro/glioblastoma derived oncogene homolog (avian) [Source:HGNC Symbol;Acc:3430] T 6536 SLC6A9 solute carrier family 6 (neurotransmitter transporter, glycine), member 9 [Source:HGNC Symbol;Acc:11056] zzz999 7094 TLN1 talin 1 [Source:HGNC Symbol;Acc:11845] zzz999 65121 PRAMEF1 PRAME family member 1 [Source:HGNC Symbol;Acc:28840] zzz999 4790 NFKB1 nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 [Source:HGNC Symbol;Acc:7794] zzz999 57645 POGK pogo transposable element with KRAB domain [Source:HGNC Symbol;Acc:18800] zzz999 9394 HS6ST1 heparan sulfate 6-O-sulfotransferase 1 [Source:HGNC Symbol;Acc:5201] zzz999 7594 ZNF43 zinc finger protein 43 [Source:HGNC Symbol;Acc:13109] T 9927 MFN2 mitofusin 2 [Source:HGNC Symbol;Acc:16877] T 10771 ZMYND11 zinc finger, MYND-type containing 11 [Source:HGNC Symbol;Acc:16966] P T 2030 SLC29A1 solute carrier family 29 (nucleoside transporters), member 1 [Source:HGNC Symbol;Acc:11003] T 51351 ZNF117 zinc finger protein 117 [Source:HGNC Symbol;Acc:12897] T 813 CALU calumenin [Source:HGNC Symbol;Acc:1458] T 7171 TPM4 tropomyosin 4 [Source:HGNC Symbol;Acc:12013] T 9152 SLC6A5 solute carrier family 6 (neurotransmitter transporter, glycine), member 5 [Source:HGNC Symbol;Acc:11051] zzz999 6602 SMARCD1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 [Source:HGNC Symbol;Acc:11106] P T 7157 TP53 tumor protein p53 [Source:HGNC Symbol;Acc:11998] T 7407 VARS valyl-tRNA synthetase [Source:HGNC Symbol;Acc:12651] zzz999 5523 PPP2R3A protein phosphatase 2, regulatory subunit B'', alpha [Source:HGNC Symbol;Acc:9307] T 9254 CACNA2D2 calcium channel, voltage-dependent, alpha 2/delta subunit 2 [Source:HGNC Symbol;Acc:1400] zzz999 2694 GIF gastric intrinsic factor (vitamin B synthesis) [Source:HGNC Symbol;Acc:4268] zzz999 9306 SOCS6 suppressor of cytokine signaling 6 [Source:HGNC Symbol;Acc:16833] T 7072 TIA1 TIA1 cytotoxic granule-associated RNA binding protein [Source:HGNC Symbol;Acc:11802] T 25778 DSTYK dual serine/threonine and tyrosine protein kinase [Source:HGNC Symbol;Acc:29043] T 22887 FOXJ3 forkhead box J3 [Source:HGNC Symbol;Acc:29178] T 5564 PRKAB1 protein kinase, AMP-activated, beta 1 non-catalytic subunit [Source:HGNC Symbol;Acc:9378] T 8621 CDK13 cyclin-dependent kinase 13 [Source:HGNC Symbol;Acc:1733] zzz999 23522 MYST4 MYST histone acetyltransferase (monocytic leukemia) 4 [Source:HGNC Symbol;Acc:17582] zzz999 10746 MAP3K2 mitogen-activated protein kinase kinase kinase 2 [Source:HGNC Symbol;Acc:6854] T 3840 KPNA4 karyopherin alpha 4 (importin alpha 3) [Source:HGNC Symbol;Acc:6397] P T 55681 SCYL2 SCY1-like 2 (S. cerevisiae) [Source:HGNC Symbol;Acc:19286] P T 6568 SLC17A1 solute carrier family 17 (sodium phosphate), member 1 [Source:HGNC Symbol;Acc:10929] zzz999 55066 PDPR pyruvate dehydrogenase phosphatase regulatory subunit [Source:HGNC Symbol;Acc:30264] T 23223 RRP12 ribosomal RNA processing 12 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:29100] zzz999 7745 ZNF192 zinc finger protein 192 [Source:HGNC Symbol;Acc:12983] zzz999 9261 MAPKAPK2 mitogen-activated protein kinase-activated protein kinase 2 [Source:HGNC Symbol;Acc:6887] T 2099 ESR1 estrogen receptor 1 [Source:HGNC Symbol;Acc:3467] T 3658 IREB2 iron-responsive element binding protein 2 [Source:HGNC Symbol;Acc:6115] T 6683 SPAST spastin [Source:HGNC Symbol;Acc:11233] T 4800 NFYA nuclear transcription factor Y, alpha [Source:HGNC Symbol;Acc:7804] T 1121 CHM choroideremia (Rab escort protein 1) [Source:HGNC Symbol;Acc:1940] T

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